R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- e2e_calculate_hrscale()
- e2e_compare_obs()
- e2e_compare_runs_bar()
- e2e_compare_runs_box()
- e2e_copy()
- e2e_extract_hr()
- e2e_extract_start()
- e2e_get_parmdoc()
- e2e_get_senscrit()
- e2e_ls()
- e2e_merge_sens_mc()
- e2e_optimize_act()
- e2e_optimize_eco()
- e2e_optimize_hr()
- e2e_plot_biomass()
- e2e_plot_catch()
- e2e_plot_eco()
- e2e_plot_edrivers()
- e2e_plot_fdrivers()
- e2e_plot_migration()
- e2e_plot_opt_diagnostics()
- e2e_plot_sens_mc()
- e2e_plot_trophic()
- e2e_plot_ts()
- e2e_plot_ycurve()
- e2e_process_sens_mc()
- e2e_read()
- e2e_run()
- e2e_run_mc()
- e2e_run_sens()
- e2e_run_ycurve()
- StrathE2E2-package()
R Codes
- aggregate_model_output.R
- assemble_flow_matrix_from_model_annual_output.R
- boxplot_annual_compare_observations.R
- boxplot_annual_compare_observations_with_ci.R
- boxplot_annual_compare_runs.R
- boxplot_monthly_compare_observations.R
- boxplot_monthly_compare_observations_with_ci.R
- boxplot_monthly_compare_runs.R
- build_annual_drivers.R
- build_initial_state.R
- build_model.R
- build_model_parameters.R
- build_model_run.R
- calculate_error_function.R
- calculate_uptakes.R
- compare_two_runs_aam.R
- compare_two_runs_catch.R
- concatenate_raw_mc_data_files.R
- concatenate_raw_sensitivity_data_files.R
- CredInt_make_aamass_results.R
- CredInt_make_annual_flux_results.R
- CredInt_make_daily_flux_results.R
- CredInt_make_daily_migration_results.R
- CredInt_make_daily_results.R
- CredInt_make_monthly_results.R
- CredInt_make_network_results.R
- CredInt_make_parameter_results.R
- CredInt_make_target_results.R
- derive_annual_results_inshore.R
- derive_annual_results_offshore.R
- derive_annual_results_wholedomain.R
- derive_model_target_results.R
- disaggregate_landings_discards_by_gear.R
- e2e_calculate_hrscale.R
- e2e_compare_obs.R
- e2e_compare_runs_bar.R
- e2e_compare_runs_box.R
- e2e_copy.R
- e2e_extract_hr.R
- e2e_extract_start.R
- e2e_get_parmdoc.R
- e2e_get_senscrit.R
- e2e_ls.R
- e2e_merge_sens_mc.R
- e2e_optimize_act.R
- e2e_optimize_eco.R
- e2e_optimize_hr.R
- e2e_plot_biomass.R
- e2e_plot_catch.R
- e2e_plot_eco.R
- e2e_plot_edrivers.R
- e2e_plot_fdrivers.R
- e2e_plot_migration.R
- e2e_plot_opt_diagnostics.R
- e2e_plot_sens_mc.R
- e2e_plot_trophic.R
- e2e_plot_ts.R
- e2e_plot_ycurve.R
- e2e_process_sens_mc.R
- e2e_read.R
- e2e_run.R
- e2e_run_mc.R
- e2e_run_sens.R
- e2e_run_ycurve.R
- extract_final_year_of_run_plus_volumetric_data.R
- extract_simulated_catch_land_disc_by_gear_for_given_year.R
- extract_timeseries_annual_landings.R
- fishing_fleet_model.R
- generate_df_yield_curve_data.R
- generate_pf_yield_curve_data.R
- internal.R
- interpolate_drivers.R
- monthly_averages_of_final_year.R
- optimize_activity_mult_eco.R
- optimize_activity_mult_hr.R
- perturb_parameters.R
- perturb_parameters_all.R
- plot_act_hr_optimization_diagnostics.R
- plot_df_yield_curve.R
- plot_eco_hr_act_eco_optimization_diagnostics.R
- plot_final_year_migration_data.R
- plot_final_year_migration_data_with_ci.R
- plot_final_year_time_series_data.R
- plot_final_year_time_series_data_with_ci.R
- plot_final_year_trophic_data.R
- plot_final_year_trophic_data_with_ci.R
- plot_for_each_gear_catch_by_guild.R
- plot_for_each_guild_catch_by_gear.R
- plot_full_length_timeseries.R
- plot_gear_activity_distribution.R
- plot_gear_guild_discard_rates.R
- plot_gear_guild_harvest_ratios.R
- plot_gear_guild_offal_rates.R
- plot_inshore_vs_offshore_anavmass.R
- plot_inshore_vs_offshore_anavmass_with_ci.R
- plot_mc_parameter_likelihoods.R
- plot_pf_yield_curve.R
- plot_seabed_abrasion_area_ratios.R
- plot_sensitivity_results.R
- plot_time_series_annual_land_disc.R
- postprocess_mc_data.R
- postprocess_sens_data.R
- process_sensitivity_analysis_results.R
- read_annual_target_data.R
- read_biological_event_timings.R
- read_chemistry_drivers.R
- read_fishing_fleet_model.R
- read_fitted_parameters.R
- read_fixed_parameters.R
- read_initial_state.R
- read_monthly_target_data.R
- read_physical_parameters.R
- read_physics_drivers.R
- read_SD_credint.R
- read_SD_ecology.R
- read_SD_fishing.R
- read_SD_sensitivity.R
- store_fleet_model_output.R
- StrathE2E2.R
- StrathE2E_fit.R
- write_fitted_parameters.R
Selected R package: StrathE2E2
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