R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- 00_phyclust-package()
- 11_d.boundary.method()
- 11_d.code.type()
- 11_d.Color()
- 11_d.edist.model()
- 11_d.em.method()
- 11_d.EMC()
- 11_d.EMControl()
- 11_d.identifier()
- 11_d.init.method()
- 11_d.init.procedure()
- 11_d.label.method()
- 11_d.se.model()
- 11_d.show.option()
- 11_d.standard.code()
- 11_d.substitution()
- as.star.tree()
- bootstrap.seq.data()
- bootstrap.seq()
- bootstrap.star.trees()
- bootstrap.star.trees.seq()
- code2nid()
- code2snp()
- data.fasta.pony()
- data.phylip.crohn()
- data.phylip.pony()
- file.read()
- file.write()
- find.best()
- find.consensus()
- gen.equal.star.anc.dec()
- gen.seq()
- gen.star.tree()
- gen.unit.K()
- get.rooted.tree.height()
- getcut.fun()
- haplo.post.prob()
- ms()
- nid.aid.cid()
- paml.baseml()
- phyclust.e.step()
- phyclust.edist()
- phyclust.em.step()
- phyclust.logL()
- phyclust.m.step()
- phyclust()
- phyclust.Pt()
- phyclust.se()
- phyclust.se.update()
- phyclust.update()
- plotdots()
- plotgaps()
- plothist()
- plotnj()
- plotstruct()
- print.summary()
- prune.Mu()
- read.seqgen()
- rescale.rooted.tree()
- RRand()
- seq.data()
- seqgen()
- snp2sid()
- zz_all.internal()
- zz_all.internal.tzeng()
R Codes
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Selected R package: phyclust
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