R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- add.tips()
- addConfidences()
- add_ci()
- add_edge_length()
- allTrees()
- Ancestors()
- ancestral.pml()
- as.networx()
- as.phyDat()
- as.splits()
- bab()
- baseFreq()
- bootstrap.pml()
- chloroplast()
- CI()
- cladePar()
- coalSpeciesTree()
- codonTest()
- consensusNet()
- cophenetic.networx()
- delta.score()
- densiTree()
- designTree()
- dfactorial()
- discrete.gamma()
- dist.hamming()
- dist.p()
- distanceHadamard()
- dna2codon()
- getClans()
- hadamard()
- identify.networx()
- image.phyDat()
- Laurasiatherian()
- lento()
- mast()
- maxCladeCred()
- midpoint()
- mites()
- modelTest()
- neighborNet()
- NJ()
- nni()
- parsimony()
- phangorn-internal()
- phangorn-package()
- phyDat()
- plot.networx()
- plotBS()
- pml.control()
- pml.fit()
- pml()
- pmlCluster()
- pmlMix()
- pmlPart()
- pml_bb()
- read.aa()
- read.nexus.splits()
- read.phyDat()
- reexports()
- SH.test()
- simSeq()
- SOWH.test()
- splitsNetwork()
- superTree()
- transferBootstrap()
- treedist()
- upgma()
- writeDist()
- yeast()
R Codes
- addConfidences.R
- ancestral_pml.R
- bab.R
- baseFreq.R
- bipart.R
- bootstrap.R
- candidate_tree.R
- cladePar.R
- clanistic.R
- Coalescent.R
- codon.R
- codonTest.R
- delta.score.R
- Densi.R
- discrete.gamma.R
- dist.p.R
- distSeq.R
- distTree.R
- draw_CI.R
- F3X4.R
- fitch64.R
- hadamard.R
- hash_phylo.R
- image_phyDat.R
- lento.R
- mast.R
- maxCladeCred.R
- modelTest.R
- neighborNet.R
- networx.R
- parsimony.R
- phangorn-package.R
- phyDat.R
- phyDat2.R
- phyDat_conversion.R
- phylo.R
- pmlMix.R
- pmlPart.R
- pmlPen.R
- pml_bb.R
- pml_control.R
- pml_generics.R
- RcppExports.R
- read.nexus.splits.R
- read.phyDat.R
- sankoff.R
- SH.R
- simSeq.R
- SOWH.R
- splits.R
- splitsNetwork.R
- superTree.R
- transferBootstrap.R
- treedist.R
- treeManipulation.R
- treeRearrangement.R
- zzz.R
Selected R package: phangorn
Click on the specific functions, references or examples using the links on the left
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