R Packages that start with:
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Functions
- active_snw_enrichment_wrapper()
- active_snw_search()
- annotate_term_genes()
- check_java_version()
- cluster_enriched_terms()
- cluster_graph_vis()
- color_kegg_pathway()
- combined_results_graph()
- combine_pathfindR_results()
- configure_output_dir()
- create_HTML_report()
- create_kappa_matrix()
- download_kegg_png()
- download_KGML_file()
- enrichment()
- enrichment_analyses()
- enrichment_chart()
- fetch_gene_set()
- fetch_java_version()
- filterActiveSnws()
- fuzzy_term_clustering()
- get_biogrid_pin()
- get_gene_sets_list()
- get_kegg_gsets()
- get_mgsigdb_gsets()
- get_pin_file()
- get_reactome_gsets()
- gset_list_from_gmt()
- hierarchical_term_clustering()
- hyperg_test()
- input_processing()
- input_testing()
- isColor()
- obtain_colored_url()
- pathfindR()
- plot_scores()
- process_pin()
- return_pin_path()
- run_pathfindR()
- score_terms()
- single_iter_wrapper()
- summarize_enrichment_results()
- term_gene_graph()
- term_gene_heatmap()
- UpSet_plot()
- visualize_active_subnetworks()
- visualize_hsa_KEGG()
- visualize_terms()
- visualize_term_interactions()
R Codes
Selected R package: pathfindR
Click on the specific functions, references or examples using the links on the left
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