R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- check_fields()
- fields_dbs()
- filter_scores()
- get_ncbi_taxonomy()
- igraph_from_taxo()
- make_ncbi_table()
- ncbi_taxo_rank()
- process_geo_ncbi()
- refdb-package()
- refdb_check_seq_conflict()
- refdb_check_seq_homogeneity()
- refdb_check_tax_conflict()
- refdb_check_tax_typo()
- refdb_clean_seq_crop_primers()
- refdb_clean_seq_remove_gaps()
- refdb_clean_seq_remove_sideN()
- refdb_clean_tax_harmonize_nomenclature()
- refdb_clean_tax_NA()
- refdb_clean_tax_remove_blank()
- refdb_clean_tax_remove_extra()
- refdb_clean_tax_remove_subsp()
- refdb_clean_tax_remove_uncertainty()
- refdb_export_dada2()
- refdb_export_idtaxa()
- refdb_export_mothur()
- refdb_fill_tax_downstream()
- refdb_fill_tax_upstream()
- refdb_filter_ref_scope()
- refdb_filter_seq_ambiguous()
- refdb_filter_seq_duplicates()
- refdb_filter_seq_homopolymers()
- refdb_filter_seq_length()
- refdb_filter_seq_primer()
- refdb_filter_seq_stopcodon()
- refdb_filter_tax_na()
- refdb_filter_tax_precision()
- refdb_get_fields()
- refdb_import_BOLD()
- refdb_import_NCBI()
- refdb_merge()
- refdb_plot_map()
- refdb_plot_seqlen_hist()
- refdb_plot_tax_barplot()
- refdb_plot_tax_tree()
- refdb_plot_tax_treemap()
- refdb_report()
- refdb_sample_tax()
- refdb_set_fields()
- refdb_set_ncbitax()
- refdb_write_fields()
- valid_taxo_rank()
- xml_extract()
R Codes
Selected R package: refdb
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