R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- checknetMHCpan()
- db_Human_Liver_AUTD17()
- db_rerun_Human_Liver_AUTD17()
- denovo_Human_Liver_AUTD17()
- export_checknetmhcpan_results()
- export_results()
- export_step2_results()
- HybridFinder()
- mhc_check()
- netmhcpan_list_alleles()
- step2_wo_netMHCpan()
R Codes
- checknetMHCpan.R
- cis_parallel.R
- convert_cis_positions_list_into_df.R
- create_spliced_non_cis_peptides.R
- create_spliced_peptides.R
- create_tmp_directory.R
- db_Human_Liver_AUTD17.R
- db_rerun_Human_liver_AUTD17.R
- denovo_Human_Liver_AUTD17.R
- export_checknetmhcpan_results.R
- export_HybridFinder_results.R
- export_step2_results.R
- find_cis_spliced_peptides.R
- find_cis_spliced_peptides_parallel.R
- find_cis_start_positions.R
- find_linear_peptides.R
- find_linear_peptides_parallel.R
- find_trans_spliced_peptides.R
- find_trans_spliced_peptides_parallel.R
- get_detailed_cis_positions.R
- HybridFinder.R
- linear_parallel.R
- load_data_for_checking_examples.R
- make_fake_HF_proteins.R
- mhc_check.R
- netmhcpan_call.R
- netmhcpan_list_alleles.R
- peptide_rerun_cleanup.R
- prepare_input_for_HF.R
- read_nmhcp_file.R
- search_for_cis_spliced_peptides.R
- search_for_linear_peptides.R
- search_for_trans_spliced_peptides.R
- step2_wo_netMHCpan.R
- trans_parallel.R
Selected R package: RHybridFinder
Click on the specific functions, references or examples using the links on the left
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