R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- analyse_mixture_result()
- analyse_mixture_results()
- as_tbl_graph.malan_pedigreelist()
- brothers_matching()
- build_haplotype_hashmap()
- build_pedigrees()
- calc_autosomal_genotype_conditional_cumdist()
- calc_autosomal_genotype_probs()
- construct_M()
- count_brothers()
- count_haplotype_near_matches_individuals()
- count_haplotype_occurrences_individuals()
- count_haplotype_occurrences_pedigree()
- count_uncles()
- delete_haplotypeids_hashmap()
- estimate_autotheta_1subpop_genotypes()
- estimate_autotheta_1subpop_individuals()
- estimate_autotheta_subpops_genotypes()
- estimate_autotheta_subpops_individuals()
- estimate_autotheta_subpops_pids()
- estimate_autotheta_subpops_unweighted_genotypes()
- estimate_autotheta_subpops_unweighted_pids()
- father_matches()
- from_igraph()
- from_igraph_rcpp()
- generate_get_founder_haplotype_db()
- generate_get_founder_haplotype_ladder()
- get_allele_counts_genotypes()
- get_allele_counts_pids()
- get_brothers()
- get_children()
- get_cousins()
- get_family_info()
- get_father()
- get_generation()
- get_haplotype()
- get_haplotypes_individuals()
- get_haplotypes_in_pedigree()
- get_haplotypes_pids()
- get_individual()
- get_individuals()
- get_matching_pids_from_hashmap()
- get_nodes_edges()
- get_pedigrees_tidy()
- get_pedigree_as_graph()
- get_pedigree_from_individual()
- get_pedigree_id()
- get_pedigree_id_from_pid()
- get_pid()
- get_pids_in_pedigree()
- get_uncles()
- get_zero_haplotype_generator()
- grandfather_matches()
- haplotypes_to_hashes()
- haplotype_matches_individuals()
- haplotype_partially_matches_individuals()
- infer_generation()
- infer_generations()
- load_haplotypes()
- load_individuals()
- malan-package()
- meioses_generation_distribution()
- meiotic_dist()
- meiotic_dist_threshold()
- meiotic_radius()
- mixture_info_by_individuals_2pers()
- mixture_info_by_individuals_3pers()
- mixture_info_by_individuals_4pers()
- mixture_info_by_individuals_5pers()
- pedigrees_all_populate_autosomal()
- pedigrees_all_populate_haplotypes()
- pedigrees_all_populate_haplotypes_custom_founders()
- pedigrees_all_populate_haplotypes_ladder_bounded()
- pedigrees_count()
- pedigrees_table()
- pedigree_as_igraph()
- pedigree_haplotype_matches_in_pedigree_meiosis_L1_dists()
- pedigree_haplotype_near_matches_meiosis()
- pedigree_size()
- pedigree_size_generation()
- plot.malan_pedigree()
- plot.malan_pedigreelist()
- population_populate_autosomal_infinite_alleles()
- population_size_generation()
- print.malan_pedigree()
- print.malan_pedigreelist()
- print.malan_population()
- print.malan_population_abort()
- print_individual()
- relationship_allele_diff_dist()
- relationship_allele_diff_dist_sym()
- sample_autosomal_genotype()
- sample_geneology()
- sample_geneology_varying_size()
- set_generation()
- split_by_haplotypes()
- sub-sub-.malan_pedigreelist()
- sub-sub-.malan_population()
- test_create_population()
- ystr_kits()
- ystr_markers()
R Codes
Selected R package: malan
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