R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- bandicoot.gl()
- cbind.dartR()
- gi2gl()
- gl.alf()
- gl.amova()
- gl.assign.grm()
- gl.assign.mahalanobis()
- gl.assign.pa()
- gl.assign.pca()
- gl.basic.stats()
- gl.blast()
- gl.check.verbosity()
- gl.collapse()
- gl.compliance.check()
- gl.costdistances()
- gl.define.pop()
- gl.diagnostics.hwe()
- gl.diagnostics.sim()
- gl.dist.ind()
- gl.dist.pop()
- gl.drop.ind()
- gl.drop.loc()
- gl.drop.pop()
- gl.edit.recode.ind()
- gl.edit.recode.pop()
- gl.evanno()
- gl.fdsim()
- gl.filter.allna()
- gl.filter.callrate()
- gl.filter.hamming()
- gl.filter.heterozygosity()
- gl.filter.hwe()
- gl.filter.ld()
- gl.filter.locmetric()
- gl.filter.maf()
- gl.filter.monomorphs()
- gl.filter.overshoot()
- gl.filter.pa()
- gl.filter.parent.offspring()
- gl.filter.rdepth()
- gl.filter.reproducibility()
- gl.filter.secondaries()
- gl.filter.sexlinked()
- gl.filter.taglength()
- gl.fixed.diff()
- gl.fst.pop()
- gl.genleastcost()
- gl.grm.network()
- gl.grm()
- gl.He()
- gl.Ho()
- gl.hwe.pop()
- gl.ibd()
- gl.impute()
- gl.install.vanilla.dartR()
- gl.join()
- gl.keep.ind()
- gl.keep.loc()
- gl.keep.pop()
- gl.ld.distance()
- gl.ld.haplotype()
- gl.LDNe()
- gl.list.reports()
- gl.load()
- gl.make.recode.ind()
- gl.make.recode.pop()
- gl.map.interactive()
- gl.map.structure()
- gl.merge.pop()
- gl.nhybrids()
- gl.outflank()
- gl.pcoa()
- gl.pcoa.plot()
- gl.percent.freq()
- gl.play.history()
- gl.plot.heatmap()
- gl.plot.network()
- gl.plot.structure()
- gl.print.history()
- gl.print.reports()
- gl.propShared()
- gl.random.snp()
- gl.read.csv()
- gl.read.dart()
- gl.read.fasta()
- gl.read.silicodart()
- gl.read.vcf()
- gl.reassign.pop()
- gl.recalc.metrics()
- gl.recode.ind()
- gl.recode.pop()
- gl.rename.pop()
- gl.report.bases()
- gl.report.callrate()
- gl.report.diversity()
- gl.report.hamming()
- gl.report.heterozygosity()
- gl.report.hwe()
- gl.report.ld.map()
- gl.report.ld()
- gl.report.locmetric()
- gl.report.maf()
- gl.report.monomorphs()
- gl.report.overshoot()
- gl.report.pa()
- gl.report.parent.offspring()
- gl.report.rdepth()
- gl.report.reproducibility()
- gl.report.secondaries()
- gl.report.sexlinked()
- gl.report.taglength()
- gl.run.structure()
- gl.sample()
- gl.save()
- gl.select.colors()
- gl.select.shapes()
- gl.set.verbosity()
- gl.sfs()
- gl.sim.create_dispersal()
- gl.sim.emigration()
- gl.sim.ind()
- gl.sim.mutate()
- gl.sim.offspring()
- gl.sim.WF.run()
- gl.sim.WF.table()
- gl.smearplot()
- gl.sort()
- gl.spatial.autoCorr()
- gl.subsample.loci()
- gl.test.heterozygosity()
- gl.tree.nj()
- gl.write.csv()
- gl2bayescan()
- gl2bpp()
- gl2demerelate()
- gl2eigenstrat()
- gl2fasta()
- gl2faststructure()
- gl2gds()
- gl2genalex()
- gl2genepop()
- gl2geno()
- gl2gi()
- gl2hiphop()
- gl2phylip()
- gl2plink()
- gl2related()
- gl2sa()
- gl2sfs()
- gl2shp()
- gl2snapp()
- gl2structure()
- gl2svdquartets()
- gl2treemix()
- gl2vcf()
- interactive_reference()
- interactive_sim_run()
- is.fixed()
- platy()
- possums.gl()
- rbind.dartR()
- sub-dartR-ANY-ANY-ANY-method()
- testset.gl()
- testset.gs()
- testset_metadata()
- testset_pop_recode()
- testset_SNPs_2Row()
- theme_dartR()
- utils.assignment()
- utils.assignment_2()
- utils.assignment_3()
- utils.assignment_4()
- utils.basic.stats()
- utils.check.datatype()
- utils.dart2genlight()
- utils.dist.binary()
- utils.dist.ind.snp()
- utils.flag.start()
- utils.hamming()
- utils.het.pop()
- utils.jackknife()
- utils.n.var.invariant()
- utils.outflank.MakeDiploidFSTMat()
- utils.outflank()
- utils.outflank.plotter()
- utils.read.dart()
- utils.recalc.avgpic()
- utils.recalc.callrate()
- utils.recalc.freqhets()
- utils.recalc.freqhomref()
- utils.recalc.freqhomsnp()
- utils.recalc.maf()
- utils.reset.flags()
- utils.spautocor()
- utils.structure.evanno()
- utils.structure.genind2gtypes()
- utils.structure.run()
- zzz()
R Codes
Selected R package: dartR
Click on the specific functions, references or examples using the links on the left
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