R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- add_deletion()
- add_dropout()
- as_igraph-data.frame-method()
- as_igraph-phylo-method()
- as_igraph()
- as_lineage_tree-phyDat-phylo-lineage_tree_config-method()
- as_lineage_tree()
- as_phylo-igraph-method()
- as_phylo()
- DCLEAR()
- dist_kmer_replacement_inference()
- dist_replacement-phyDat-kmer_summary-integer-method()
- dist_replacement-phyDat-missing-integer-method()
- dist_replacement()
- dist_weighted_hamming-phyDat-numeric-method()
- dist_weighted_hamming()
- downsample-igraph-method()
- downsample-lineage_tree-method()
- downsample()
- get_distance_prior()
- get_leaves-lineage_tree-method()
- get_leaves()
- get_node_names()
- get_replacement_probability()
- get_sequence()
- get_transition_probability()
- lineages()
- positional_mutation_prob()
- process_sequence-phyDat-method()
- process_sequence()
- prune-igraph-method()
- prune-lineage_tree-method()
- prune()
- random_tree()
- rbind-phyDat-method()
- sample_mutation_outcome()
- sample_mutation_site()
- sample_outcome_prob()
- score_simulation()
- simulate-lineage_tree_config-missing-method()
- simulate-lineage_tree_config-phyDat-method()
- simulate()
- simulate_core()
- sim_seqdata()
- substr_kmer-kmer_summary-method()
- substr_kmer()
- subtract-lineage_tree-lineage_tree-method()
- subtract()
- subtree-lineage_tree-method()
- subtree-phylo-method()
- subtree()
- summarize_kmer-phyDat-method()
- summarize_kmer()
- summarize_kmer_core()
- WH()
- WH_train()
- WH_train_fit()
R Codes
Selected R package: DCLEAR
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