R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- aa.index()
- aa.table()
- aa2index()
- aa2mass()
- aa123()
- aanma.pdb()
- aanma.pdbs()
- aln2html()
- angle.xyz()
- as.fasta()
- as.pdb()
- as.select()
- atom.index()
- atom.select()
- atom2ele()
- atom2mass()
- atom2xyz()
- basename.pdb()
- bhattacharyya()
- binding.site()
- bio3d.package()
- biounit()
- blast.pdb()
- bounds()
- bounds.sse()
- bwr.colors()
- cat.pdb()
- chain.pdb()
- check.utility()
- clean.pdb()
- cmap()
- cna()
- cnapath()
- com()
- combine.select()
- community.aln()
- community.tree()
- consensus()
- conserv()
- convert.pdb()
- core.cmap()
- core.find()
- cov.nma()
- covsoverlap()
- dccm.enma()
- dccm.gnm()
- dccm.nma()
- dccm()
- dccm.pca()
- dccm.xyz()
- deformation.nma()
- diag.ind()
- difference.vector()
- dist.xyz()
- dm()
- dssp()
- elements()
- entropy()
- example.data()
- filter.cmap()
- filter.dccm()
- filter.identity()
- filter.rmsd()
- fit.xyz()
- fluct.nma()
- formula2mass()
- gap.inspect()
- geostas()
- get.pdb()
- get.seq()
- gnm()
- hclustplot()
- hmmer()
- identify.cna()
- inner.prod()
- inspect.connectivity()
- is.gap()
- is.mol2()
- is.pdb()
- is.select()
- is.xyz()
- layout.cna()
- lbio3d()
- load.enmff()
- mask.dccm()
- mktrj()
- motif.find()
- mustang()
- network.amendment()
- nma()
- nma.pdb()
- nma.pdbs()
- normalize.vector()
- orient.pdb()
- overlap()
- pairwise()
- pca.array()
- pca()
- pca.pdbs()
- pca.tor()
- pca.xyz()
- pdb.annotate()
- pdb2aln.ind()
- pdb2aln()
- pdb2sse()
- pdbaln()
- pdbfit()
- pdbs2pdb()
- pdbs2sse()
- pdbseq()
- pdbsplit()
- pfam()
- plot.bio3d()
- plot.cmap()
- plot.cna()
- plot.core()
- plot.dccm()
- plot.dmat()
- plot.enma()
- plot.fasta()
- plot.fluct()
- plot.geostas()
- plot.hmmer()
- plot.matrix.loadings()
- plot.nma()
- plot.pca.loadings()
- plot.pca()
- plot.rmsip()
- print.cna()
- print.core()
- print.fasta()
- print.xyz()
- project.pca()
- prune.cna()
- pymol()
- read.all()
- read.cif()
- read.crd.amber()
- read.crd.charmm()
- read.crd()
- read.dcd()
- read.fasta()
- read.fasta.pdb()
- read.mol2()
- read.ncdf()
- read.pdb()
- read.pdcBD()
- read.pqr()
- read.prmtop()
- rgyr()
- rle2()
- rmsd()
- rmsf()
- rmsip()
- sdENM()
- seq2aln()
- seqaln()
- seqaln.pair()
- seqbind()
- seqidentity()
- setup.ncore()
- sip()
- sse.bridges()
- store.atom()
- struct.aln()
- torsion.pdb()
- torsion.xyz()
- trim.mol2()
- trim.pdb()
- trim.pdbs()
- trim.xyz()
- unbound()
- uniprot()
- var.xyz()
- vec2resno()
- vmd.cna()
- vmd_colors()
- wrap.tor()
- write.crd()
- write.fasta()
- write.mol2()
- write.ncdf()
- write.pdb()
- write.pir()
- write.pqr()
R Codes
- aa2index.R
- aa2mass.R
- aa123.R
- aa321.R
- aanma.pdb.R
- aanma.pdbs.R
- aanma.R
- aln2html.R
- amsm.xyz.R
- angle.xyz.R
- arg_filter.R
- as.fasta.R
- as.pdb.mol2.R
- as.pdb.prmtop.R
- as.pdb.R
- as.select.R
- as.xyz.R
- atom.select.mol2.R
- atom.select.pdb.R
- atom.select.pdbs.R
- atom.select.prmtop.R
- atom.select.R
- atom2ele.R
- atom2mass.R
- atom2xyz.R
- basename.pdb.R
- bhattacharyya.R
- binding.site.R
- biounit.R
- blast.pdb.R
- bounds.R
- bounds.sse.R
- build.hessian.R
- bwr.colors.R
- cat.pdb.R
- chain.pdb.R
- check.utility.R
- clean.pdb.R
- cmap.pdb.R
- cmap.R
- cna.dccm.R
- cna.ensmb.R
- cna.R
- cnapath.R
- com.pdb.R
- com.R
- com.xyz.R
- combine.select.R
- community.aln.R
- community.tree.R
- consensus.R
- conserv.R
- convert.pdb.R
- core.cmap.R
- core.find.R
- cov.nma.R
- covsoverlap.R
- dccm.enma.R
- dccm.gnm.R
- dccm.nma.R
- dccm.pca.R
- dccm.R
- dccm.xyz.R
- deformation.nma.R
- diag.ind.R
- difference.vector.R
- dist.xyz.R
- dm.R
- dm.xyz.R
- dssp.pdb.R
- dssp.pdbs.R
- dssp.R
- dssp.xyz.R
- entropy.R
- exefile.R
- filter.cmap.R
- filter.dccm.R
- filter.identity.R
- filter.rmsd.R
- fit.xyz.R
- fluct.nma.R
- formula2mass.R
- gap.inspect.R
- geostas.R
- get.blast.R
- get.pdb.R
- get.seq.R
- gnm.pdbs.R
- gnm.R
- hclustplot.R
- hmmer.R
- identify.cna.R
- inner.prod.R
- inspect.connectivity.R
- is.gap.R
- is.mol2.R
- is.pdb.R
- is.select.R
- is.xyz.R
- layout.cna.R
- lbio3d.R
- load.enmff.R
- mask.dccm.R
- mktrj.enma.R
- mktrj.nma.R
- mktrj.pca.R
- mktrj.R
- mono.colors.R
- motif.find.R
- mustang.R
- network.amendment.R
- nma.pdb.R
- nma.pdbs.R
- nma.R
- nma_funs.R
- normalize.vector.R
- orient.pdb.R
- overlap.R
- pairwise.R
- pb.R
- pca.array.R
- pca.pdbs.R
- pca.R
- pca.tor.R
- pca.xyz.R
- pdb.annotate.R
- pdb.pfam.R
- pdb2aln.ind.R
- pdb2aln.R
- pdb2sse.R
- pdbaln.R
- pdbfit.R
- pdbs2pdb.R
- pdbs2sse.R
- pdbseq.R
- pdbsplit.R
- pfam.R
- plot.blast.R
- plot.cmap.R
- plot.cna.R
- plot.core.R
- plot.dccm.R
- plot.dmat.R
- plot.enma.R
- plot.fasta.R
- plot.fluct.R
- plot.geostas.R
- plot.hmmer.R
- plot.matrix.loadings.R
- plot.nma.R
- plot.pca.loadings.R
- plot.pca.R
- plot.pca.score.R
- plot.pca.scree.R
- plot.rmsip.R
- plotb3.R
- print.cna.R
- print.core.R
- print.enma.R
- print.fasta.R
- print.geostas.R
- print.nma.R
- print.pca.R
- print.pdb.R
- print.prmtop.R
- print.select.R
- print.sse.R
- print.xyz.R
- project.pca.R
- prune.cna.R
- pymol.dccm.R
- pymol.modes.R
- pymol.pdbs.R
- RcppExports.R
- read.all.R
- read.cif.R
- read.crd.amber.R
- read.crd.charmm.R
- read.crd.R
- read.dcd.R
- read.fasta.pdb.R
- read.fasta.R
- read.mol2.R
- read.ncdf.R
- read.pdb.R
- read.pdb2.R
- read.pdcBD.R
- read.pqr.R
- read.prmtop.R
- rgyr.R
- rle2.R
- rmsd.R
- rmsf.R
- rmsip.R
- rot.lsq.R
- rtb.R
- seq2aln.R
- seqaln.pair.R
- seqaln.R
- seqbind.R
- seqidentity.R
- setup.ncore.R
- sip.R
- sse.bridges.R
- store.atom.R
- stride.R
- struct.aln.R
- summary.cna.R
- summary.cnapath.R
- summary.pdb.R
- torsion.pdb.R
- torsion.xyz.R
- trim.mol2.R
- trim.pdb.R
- trim.pdbs.R
- trim.xyz.R
- unbound.R
- uniprot.R
- var.xyz.R
- vec2resno.R
- vmd.cna.R
- vmd.cnapath.R
- vmd.R
- vmd_colors.R
- wrap.tor.R
- write.crd.R
- write.fasta.R
- write.mol2.R
- write.ncdf.R
- write.pdb.R
- write.pir.R
- write.pqr.R
- xyz2atom.R
Selected R package: bio3d
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