R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- BEDASSLE-internal()
- BEDASSLE-package()
- calculate.all.pairwise.Fst()
- calculate.pairwise.Fst()
- Covariance()
- HGDP.bedassle.data()
- link.up.posteriors()
- make.continuing.params()
- MCMC()
- mcmc.operators()
- MCMC_BB()
- plot_acceptance_rate()
- plot_all_acceptance_rates()
- plot_all_joint_marginals()
- plot_all_marginals()
- plot_all_phi_marginals()
- plot_all_phi_trace()
- plot_all_trace()
- plot_joint_marginal()
- plot_marginal()
- plot_phi_marginal()
- plot_phi_trace()
- plot_posterior_predictive_samples()
- plot_trace()
- posterior.predictive.sample()
R Codes
- a0_gibbs_rate.R
- BB_Likelihood_counts.R
- BB_Prior_prob_phi.R
- BB_Update_mu.R
- BB_Update_phi.R
- BB_Update_thetas.R
- calculate.all.pairwise.Fst.R
- calculate.pairwise.Fst.R
- Covariance.R
- identify_invariant_loci.R
- Initialize.params.R
- Likelihood_counts.R
- Likelihood_thetas.R
- link.up.posteriors.R
- load_MCMC_output.R
- load_posterior_predictive_samples.R
- make.continuing.params.R
- MCMC.R
- MCMC_BB.R
- plot_acceptance_rate.R
- plot_all_acceptance_rates.R
- plot_all_joint_marginals.R
- plot_all_marginals.R
- plot_all_phi_marginals.R
- plot_all_phi_trace.R
- plot_all_trace.R
- plot_joint_marginal.R
- plot_marginal.R
- plot_phi_marginal.R
- plot_phi_trace.R
- plot_posterior_predictive_samples.R
- plot_trace.R
- posterior.predictive.sample.R
- Prior_prob_alpha0.R
- Prior_prob_alpha2.R
- Prior_prob_alphaD.R
- Prior_prob_alphaE.R
- Prior_prob_beta.R
- Prior_prob_mu.R
- Shift.R
- simulate_allele_count_data.R
- transform_frequencies.R
- Update_a0.R
- Update_a2.R
- Update_aD.R
- Update_aE.R
- Update_beta.R
- Update_mu.R
- Update_thetas.R
Selected R package: BEDASSLE
Click on the specific functions, references or examples using the links on the left
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