R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- averageMatrixEdges()
- calcCNVKernelProbDist()
- calcVecLMs()
- CNVScopeserver()
- createChromosomalMatrixSet()
- divisors()
- downsample_genomic_matrix()
- extractNegLogPval()
- formSampleMatrixFromRawGDCData()
- freadGDCfile()
- getAnnotationMatrix()
- getAsymmetricBlockIndices()
- getBlockAverageMatrixFromBreakpoints()
- getGlobalRescalingStats()
- getInterchromosomalInteractivePlot()
- GRanges_to_underscored_pos()
- importBreakpointBed()
- mathead()
- nbl_result_matrix_sign_small()
- postProcessLinRegMatrix()
- rebinGenomicInteractions()
- runCNVScopeLocal()
- runCNVScopeShiny()
- signedRescale()
- underscored_pos_to_GRanges()
- writeAsymmetricMeltedChromosomalMatrixToDisk()
- writeMeltedChromosomalMatrixToDisk()
R Codes
- averageMatrixEdges.R
- calcCNVKernelProbDist.R
- calcVecLMs.R
- CNVScopeserver.R
- createChromosomalMatrixSet.R
- divisors.R
- downsample_genomic_matrix.R
- extractNegLogPval.R
- formSampleMatrixFromRawGDCData.R
- freadGDCfile.R
- getAnnotationMatrix.R
- getAsymmetricBlockIndices.R
- getBlockAverageMatrixFromBreakpoints.R
- getGlobalRescalingStats.R
- getInterchromosomalInteractivePlot.R
- GRanges_to_underscored_pos.R
- importBreakpointBed.R
- mathead.R
- nbl_result_matrix_sign_small.R
- postProcessLinRegMatrix.R
- rebinGenomicInteractions.R
- runCNVScopeLocal.R
- runCNVScopeShiny.R
- signedRescale.R
- underscored_pos_to_GRanges.R
- writeAsymmetricMeltedMatrixToDisk.R
- writeMeltedChromosomalMatrixToDisk.R
Selected R package: CNVScope
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