R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- add_numbers_above_the_bars()
- assign_link_operator_value_to_equation()
- biomarker_mcc_analysis()
- biomarker_synergy_analysis()
- biomarker_tp_analysis()
- calculate_mcc()
- calculate_models_mcc()
- calculate_models_synergies_fn()
- calculate_models_synergies_fp()
- calculate_models_synergies_tn()
- calculate_models_synergies_tp()
- construct_network()
- count_models_that_predict_synergies()
- emba()
- filter_network()
- get_alt_drugname()
- get_avg_activity_diff_based_on_mcc_clustering()
- get_avg_activity_diff_based_on_specific_synergy_prediction()
- get_avg_activity_diff_based_on_synergy_set_cmp()
- get_avg_activity_diff_based_on_tp_predictions()
- get_avg_activity_diff_mat_based_on_mcc_clustering()
- get_avg_activity_diff_mat_based_on_specific_synergy_prediction()
- get_avg_activity_diff_mat_based_on_tp_predictions()
- get_avg_link_operator_diff_based_on_synergy_set_cmp()
- get_avg_link_operator_diff_mat_based_on_mcc_clustering()
- get_avg_link_operator_diff_mat_based_on_specific_synergy_prediction()
- get_avg_link_operator_diff_mat_based_on_tp_predictions()
- get_biomarkers()
- get_biomarkers_per_type()
- get_edges_from_topology_file()
- get_fitness_from_models_dir()
- get_link_operators_from_models_dir()
- get_models_based_on_mcc_class_id()
- get_model_names()
- get_model_predictions()
- get_neighbors()
- get_node_colors()
- get_node_names()
- get_observed_model_predictions()
- get_observed_synergies()
- get_observed_synergies_per_cell_line()
- get_perf_biomarkers_per_cell_line()
- get_stable_state_from_models_dir()
- get_synergy_biomarkers_from_dir()
- get_synergy_biomarkers_per_cell_line()
- get_synergy_comparison_sets()
- get_synergy_scores()
- get_synergy_subset_stats()
- get_unobserved_model_predictions()
- get_vector_diff()
- get_x_axis_values()
- is_comb_element_of()
- make_barplot_on_models_stats()
- make_barplot_on_synergy_subset_stats()
- plot_avg_link_operator_diff_graph()
- plot_avg_link_operator_diff_graphs()
- plot_avg_state_diff_graph()
- plot_avg_state_diff_graphs()
- plot_avg_state_diff_graph_vis()
- plot_mcc_classes_hist()
- print_biomarkers_per_predicted_synergy()
- print_model_and_drug_stats()
- update_biomarker_files()
- validate_observed_synergies_data()
R Codes
Selected R package: emba
Click on the specific functions, references or examples using the links on the left
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