R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- codon_replacement()
- codon_replacement_reconstruction()
- combine_into_paired()
- gen_code()
- hotspot_df()
- hub_seqs_exclusion()
- immuneSIM()
- insertions_and_deletion_lengths_df()
- length_dist_simulation()
- list_example_repertoires()
- list_germline_genes_allele_01()
- load_insdel_data()
- motif_implantation()
- one_spot_df()
- plot_repertoire_A_vs_B()
- plot_report_repertoire()
- shm_event_reconstruction()
R Codes
- add_clone_count.R
- calc_vdj_occ.R
- codon_replacement.R
- codon_replacement_reconstruction.R
- combine_into_paired.R
- data.R
- dropout_VDJ.R
- get_AA_freq_distribution.R
- hub_seqs_exclusion.R
- immuneSIM.R
- immuneSim_random.R
- immuneSim_standard.R
- kmer_occurrence_opt_k_m_gen.R
- load_insdel_data.R
- make_kmer_dictionary.R
- motif_implantation.R
- new_insertion_deletion_df.R
- noiseify_VDJ_freqs.R
- plot_repertoire_A_vs_B.R
- plot_report_repertoire.R
- plot_report_repertoire_AA_freq.R
- plot_report_repertoire_AA_freq_comparative.R
- plot_vdj_occ.R
- record_shm_events.R
- shm_event_reconstruction.R
- somatic_hypermutation_sim.R
- theme_akbar.R
- update_vdj_freqs.R
Selected R package: immuneSIM
Click on the specific functions, references or examples using the links on the left
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