R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- Analyses()
- AnalyzeGeneSets()
- ApplyContrasts()
- as.Seurat.grandR()
- CalibrateEffectiveLabelingTimeKineticFit()
- CalibrateEffectiveLabelingTimeMatchHalflives()
- check.analysis()
- ClassifyGenes()
- Coldata()
- ComputeAbsolute()
- ComputeExpressionPercentage()
- ComputeNonConstantParam()
- ComputeNtrPosteriorQuantile()
- ComputePseudoNtr()
- ComputeSteadyStateHalfLives()
- ComputeSummaryStatistics()
- Condition()
- correctdropout()
- CreatePdfs()
- data.apply()
- DefaultSlot()
- Defer()
- density2d()
- DESeq2BIC()
- Design()
- DesignSemantics()
- dropout()
- dropoutpercent()
- estimate.dispersion()
- EstimateRegulation()
- f.nonconst.linear()
- f.nonconst()
- f.old.equi()
- FilterGenes()
- Findno4sUPairs()
- FindReferences()
- FitKinetics()
- FitKineticsGeneLeastSquares()
- FitKineticsGeneLogSpaceLinear()
- FitKineticsGeneNtr()
- FitKineticsGeneSnapshot()
- FitKineticsPulseR()
- FitKineticsSnapshot()
- FormatCorrelation()
- GeneInfo()
- Genes()
- get.mode.slot()
- GetAnalysisTable()
- GetContrasts()
- GetData()
- GetDiagnosticParameters()
- GetMatrix()
- GetSignificantGenes()
- GetSummarizeMatrix()
- GetTable()
- grandR()
- IsParallel()
- LFC()
- LikelihoodRatioTest()
- ListGeneSets()
- MakeColdata()
- MAPlot()
- Normalize()
- NormalizeBaseline()
- Pairwise()
- PairwiseDESeq2()
- PlotAnalyses()
- PlotConversionFreq()
- PlotGeneGroupsBars()
- PlotGeneGroupsPoints()
- PlotGeneOldVsNew()
- PlotGeneProgressiveTimecourse()
- PlotGeneSnapshotTimecourse()
- PlotGeneTotalVsNtr()
- PlotHeatmap()
- PlotMismatchPositionForSample()
- PlotMismatchPositionForType()
- PlotModelCompareConv()
- PlotModelCompareErr()
- PlotModelCompareErrPrior()
- PlotModelCompareLL()
- PlotModelCompareNtr()
- PlotModelConv()
- PlotModelErr()
- PlotModelLabelTimeCourse()
- PlotModelNtr()
- PlotModelShape()
- PlotPCA()
- PlotProfileLikelihood()
- Plots()
- PlotScatter()
- PlotSimulation()
- PlotTypeDistribution()
- psapply()
- ReadCounts()
- ReadGRAND()
- ReadGRAND3()
- ReadNewTotal()
- RotatateAxisLabels()
- SaveNtrSlot()
- Scale()
- Semantics.concentration()
- Semantics.time()
- ServeGrandR()
- SetParallel()
- SimulateKinetics()
- SimulateReadsForSample()
- SimulateTimeCourse()
- SimulateTimeCourseNonConstant()
- Slots()
- structure2vector()
- ToIndex()
- Transform.no()
- TransformSnapshot()
- UpdateSymbols()
- UseNtrSlot()
- VulcanoPlot()
R Codes
Selected R package: grandR
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