R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- alphablend()
- annot.outline.border.vertices()
- annot.outline()
- apply.label.to.morphdata()
- apply.labeldata.to.morphdata()
- apply.transform()
- arrange.brainview.images.grid()
- arrange.brainview.images()
- boxcoords.from.bbox()
- brain()
- brainview.sd()
- brainview.si()
- brainview.sr()
- brainview.t4()
- brainview.t9()
- brainviews()
- can.plot.colorbar.from.coloredmeshes()
- can.plot.colorbar()
- check.subjects.files()
- check.subjectslist()
- clip.data()
- clip_fun()
- cm.cbry()
- cm.div()
- cm.heat()
- cm.qual()
- cm.seq()
- collayer.bg.atlas()
- collayer.bg.meancurv()
- collayer.bg()
- collayer.bg.sulc()
- collayer.from.annot()
- collayer.from.annotdata()
- collayer.from.mask.data()
- collayer.from.morphlike.data()
- collayers.merge()
- coloredmesh.from.annot()
- coloredmesh.from.color()
- coloredmesh.from.label()
- coloredmesh.from.mask()
- coloredmesh.from.morph.native()
- coloredmesh.from.morph.standard()
- coloredmesh.from.morphdata()
- coloredmesh.from.preloaded.data()
- coloredmesh.plot.colorbar.separate()
- coloredmeshes.combined.data.range()
- coloredmeshes.from.color()
- coloredmeshes.get.md()
- colorlist.brain.clusters()
- colors.are.grayscale()
- colors.have.transparency()
- combine.colorbar.with.brainview.animation()
- combine.colorbar.with.brainview.image()
- combine.colorbar.with.brainview.image.vertical()
- common.makecmap.range()
- constant.pervertexdata()
- cube3D.tris()
- cubes3D.tris()
- deepcopylist.long()
- deg2rad()
- delete_all_optional_data()
- demo()
- demographics.to.fsgd.file()
- demographics.to.qdec.table.dat()
- desaturate()
- download_fsaverage()
- download_fsaverage3()
- download_optional_data()
- download_optional_paper_data()
- draw.colorbar()
- eeg_coords()
- ensure.fs.surface()
- ensure.tmesh3d()
- export.coloredmesh.ply()
- export()
- extend_neighbors()
- extract.volume.3D()
- face.edges()
- find.freesurferhome()
- find.subjectsdir.of()
- flc()
- force.to.range()
- fs.coloredmesh()
- fs.home()
- fs.surface.as.adjacencylist()
- fs.surface.to.igraph()
- fs.surface.to.tmesh3d()
- fs.surface.vertex.neighbors()
- fs.value.list.from.agg.res()
- fsaverage.path()
- fsbrain.renderable()
- fsbrain.set.default.figsize()
- fslong.subjects.detect()
- fslong.subjects.finished()
- fup()
- gen.test.volume()
- geod.patches.color.overlay()
- geod.patches.color.overlay.singlehemi()
- geod.patches.pervertexdata()
- geod.patches.pervertexdata.singlehemi()
- geod.vert.neighborhood()
- geodesic.average.distance()
- geodesic.ballstats()
- geodesic.circles()
- geodesic.dists.to.vertex()
- geodesic.path()
- get.atlas.region.names()
- get.rglstyle.default()
- get.rglstyle.edges()
- get.rglstyle.glass()
- get.rglstyle.glass2()
- get.rglstyle()
- get.rglstyle.parameters()
- get.rglstyle.semitransparent()
- get.rglstyle.shiny()
- get.slice.indices()
- get.subject.class()
- get.view.angle.names()
- getIn()
- get_optional_data_filepath()
- group.agg.atlas.native()
- group.agg.atlas.standard()
- group.annot()
- group.concat.measures.native()
- group.concat.measures.standard()
- group.data.to.array()
- group.label.from.annot()
- group.label()
- group.morph.agg.native()
- group.morph.agg.standard()
- group.morph.agg.standard.vertex()
- group.morph.native()
- group.morph.standard()
- group.morph.standard.sf()
- group.multimorph.agg.native()
- group.multimorph.agg.standard()
- group.surface()
- groupmorph.split.hemilist()
- handle.rglactions.highlight.points()
- hasIn()
- hemi.lobe.labels()
- hemilist.derive.hemi()
- hemilist.from.prefixed.list()
- hemilist.get.combined.data()
- hemilist()
- hemilist.unwrap()
- hemilist.wrap()
- hemlist.ensure.contains()
- highlight.points.spheres()
- highlight.vertices.on.subject()
- highlight.vertices.on.subject.spheres()
- highlight.vertices.spheres()
- hull.retain.along.axis()
- image.remap.color()
- images.annotate()
- images.dimmax()
- images.rescale.to.max.canvas()
- images.same.height()
- images.same.width()
- is.fs.coloredmesh()
- is.fs.coloredvoxels()
- is.fsbrain()
- is.hemilist()
- is.Triangles3D()
- label.border.fast()
- label.border()
- label.colFn.inv()
- label.colFn()
- label.from.annotdata()
- label.to.annot()
- labeldata.from.mask()
- limit_fun()
- limit_fun_na()
- limit_fun_na_inside()
- list_optional_data()
- magick.grid()
- mask.from.labeldata.for.hemi()
- mergehemi.annots()
- mesh.vertex.included.faces()
- mesh.vertex.neighbors()
- mkco.cluster()
- mkco.div()
- mkco.heat()
- mkco.seq()
- normalize()
- numverts.lh()
- numverts.rh()
- path.colors.from.orientation()
- path.slopes()
- per.hemi.vertex.indices()
- perform.na.mapping()
- perform.rglactions()
- pervertexdata.smoothgaussian()
- pervertexdata.smoothnn.compute.fwhm()
- pervertexdata.smoothnn.compute.numiter()
- pervertexdata.smoothnn()
- plot.fsbrain.colorbar()
- pp.named.list()
- principal.curvatures()
- print.fs.coloredmesh()
- print.fs.coloredvoxels()
- print.fsbrain()
- qc.for.group()
- qc.from.regionwise.df()
- qc.from.segstats.table()
- qc.from.segstats.tables()
- qc.fslong.checkidenticaldata()
- qc.report.html()
- qc.vis.failcount.by.region()
- qdec.table.filter()
- qdec.table.skeleton()
- rad2deg()
- ras2vox_tkr()
- read.colorcsv()
- read.md.demographics()
- read.md.subjects.from.fsgd()
- read.md.subjects()
- recycle()
- regions.to.ignore()
- report.on.demographics()
- rgl.coord.lines()
- rglactions.has.key()
- rglactions()
- rglactions.transform()
- rglo()
- rglot()
- rglvoxels()
- rotation.matrix.for.axis.rot()
- scale.to.range.zero.one()
- scale01()
- shape.descriptor.names()
- shape.descriptors()
- shift.hemis.apart()
- shift.hemis.rglactions()
- sjd.demo()
- sjld()
- sortcoloredmeshes.by.hemi()
- sph2fs()
- spread.values.over.annot()
- spread.values.over.hemi()
- spread.values.over.subject()
- subject.annot.border()
- subject.annot()
- subject.atlas.agg()
- subject.descriptor.geodesic.average.distance()
- subject.filepath.any()
- subject.filepath.morph.native()
- subject.filepath.morph.standard()
- subject.label.from.annot()
- subject.label()
- subject.lobes()
- subject.mask()
- subject.morph.native()
- subject.morph.standard()
- subject.num.verts()
- subject.report.html()
- subject.surface()
- subject.volume()
- submesh.vertex()
- surf.avg.vertexradius()
- surf.center.fsaverage()
- surf.metric.properties()
- surf.radius.fsaverage()
- surf.sphere.dist()
- surf.sphere.gaussianweights()
- surf.sphere.spatialfilter()
- surface.curvatures()
- surfs.props()
- symmrange()
- test.numerical.meandiff()
- test.numerical.meandiff.paired()
- test.numerical.meandiff.unpaired()
- tmesh3d.to.fs.surface()
- track.length()
- vdata.split.by.hemi()
- vertex.coords()
- vertex.hemis()
- vis.color.on.subject()
- vis.coloredmesh()
- vis.coloredmeshes()
- vis.coloredmeshes.rotating()
- vis.colortable.legend()
- vis.data.on.fsaverage()
- vis.data.on.group.native()
- vis.data.on.group.standard()
- vis.data.on.subject()
- vis.dti.trk()
- vis.export.from.coloredmeshes()
- vis.fs.surface()
- vis.group.annot()
- vis.group.coloredmeshes()
- vis.group.morph.native()
- vis.group.morph.standard()
- vis.labeldata.on.subject()
- vis.mask.on.subject()
- vis.path.along.verts()
- vis.paths.along.verts()
- vis.paths()
- vis.region.values.on.subject()
- vis.renderable()
- vis.rotated.coloredmeshes()
- vis.seg.legend()
- vis.subject.annot()
- vis.subject.label()
- vis.subject.morph.native()
- vis.subject.morph.standard()
- vis.subject.pre()
- vis.symmetric.data.on.subject()
- vislayout.from.coloredmeshes()
- vol.boundary.box.apply()
- vol.boundary.box()
- vol.boundary.mask()
- vol.hull()
- vol.imagestack()
- vol.intensity.to.color()
- vol.mask.from.segmentation()
- vol.merge()
- vol.overlay.colors.from.activation()
- vol.overlay.colors.from.colortable()
- vol.plane.axes()
- vol.planes()
- vol.slice()
- vol.vox.from.crs()
- volvis.contour()
- volvis.lb()
- volvis.lightbox()
- volvis.voxels()
- vox2ras_tkr()
- wrapped.image.append()
- write.group.morph.standard.mf()
- write.group.morph.standard()
- write.group.morph.standard.sf()
- write.group.morph.standard.singlehemi()
- write.region.aggregated()
- write.region.values.fsaverage()
- write.region.values()
R Codes
- atlas.R
- brainview_magick.R
- brain_igraph.R
- cbar.R
- cbar_magick.R
- coloredmesh.R
- curvature.R
- export.R
- fsdir_abstraction_group.R
- fsdir_abstraction_subject.R
- geodesic.R
- helpers.R
- helpers_magick.R
- hemilist.R
- highlight.R
- metadata_io.R
- morph_agg.R
- morph_atlas_agg.R
- morph_concat.R
- optdata.R
- rglactions.R
- seg_stats.R
- smooth.R
- spatial.R
- spherical.R
- vis.R
- vis_dti_tracks.R
- vis_group.R
- vis_meshes.R
- vis_multiview.R
- vis_surface_background.R
- vis_volume.R
- vis_volume_3d.R
- volume.R
Selected R package: fsbrain
Click on the specific functions, references or examples using the links on the left
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