R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- aggregate_vimp_table-methods()
- as_data_object-methods()
- as_familiar_collection-methods()
- as_familiar_data-methods()
- as_familiar_ensemble-methods()
- coef-methods()
- create_randomised_groups()
- dataObject-class()
- dot-check_class_level_plausibility()
- dot-check_feature_availability()
- dot-check_input_identifier_column()
- dot-check_outcome_type_plausibility()
- dot-check_survival_time_plausibility()
- dot-finish_data_preparation()
- dot-get_default_sign_size()
- dot-get_iteration_data()
- dot-impute_outcome_type()
- dot-load_iterations()
- dot-parse_categorical_features()
- dot-parse_evaluation_settings()
- dot-parse_experiment_settings()
- dot-parse_feature_selection_settings()
- dot-parse_file_paths()
- dot-parse_general_settings()
- dot-parse_hyperparameter_optimisation_settings()
- dot-parse_initial_settings()
- dot-parse_model_development_settings()
- dot-parse_preprocessing_settings()
- dot-parse_setup_settings()
- dot-plot_permutation_variable_importance()
- dot-plot_univariate_importance()
- dot-prepare_familiar_data_sets()
- dot-update_experimental_design_settings()
- dot-update_initial_settings()
- encapsulate_path()
- experimentData-class()
- export_all-methods()
- export_auc_data-methods()
- export_calibration_data-methods()
- export_calibration_info-methods()
- export_confusion_matrix_data-methods()
- export_decision_curve_analysis_data-methods()
- export_feature_expressions-methods()
- export_feature_similarity-methods()
- export_fs_vimp-methods()
- export_hyperparameters-methods()
- export_ice_data-methods()
- export_model_performance-methods()
- export_model_vimp-methods()
- export_partial_dependence_data-methods()
- export_permutation_vimp-methods()
- export_prediction_data-methods()
- export_risk_stratification_data-methods()
- export_risk_stratification_info-methods()
- export_sample_similarity-methods()
- export_univariate_analysis_data-methods()
- extract_auc_data()
- extract_calibration_data()
- extract_calibration_info()
- extract_confusion_matrix()
- extract_data()
- extract_decision_curve_data()
- extract_dispatcher-familiarEnsemble-familiarDataElement-method()
- extract_experimental_setup()
- extract_feature_expression()
- extract_feature_similarity()
- extract_fs_vimp()
- extract_hyperparameters()
- extract_ice()
- extract_model_vimp()
- extract_performance()
- extract_permutation_vimp()
- extract_predictions()
- extract_risk_stratification_data()
- extract_risk_stratification_info()
- extract_sample_similarity()
- extract_univariate_analysis()
- familiar()
- familiarCollection-class()
- familiarData-class()
- familiarDataElement-class()
- familiarEnsemble-class()
- familiarHyperparameterLearner-class()
- familiarMetric-class()
- familiarModel-class()
- familiarNoveltyDetector-class()
- familiarVimpMethod-class()
- featureInfo-class()
- featureInfoParameters-class()
- get_class_names-familiarCollection-method()
- get_data_set_names-familiarCollection-method()
- get_feature_names-familiarCollection-method()
- get_fs_method_names-familiarCollection-method()
- get_learner_names-familiarCollection-method()
- get_risk_group_names-familiarCollection-method()
- get_vimp_table-methods()
- get_xml_config()
- is.encapsulated_path()
- is.waive()
- outcomeInfo-class()
- plotting.check_data_handling()
- plotting.check_input_args()
- plot_auc_precision_recall_curve-methods()
- plot_auc_roc_curve-methods()
- plot_calibration_data-methods()
- plot_confusion_matrix-methods()
- plot_decision_curve-methods()
- plot_feature_similarity-methods()
- plot_ice-methods()
- plot_kaplan_meier-methods()
- plot_model_performance-methods()
- plot_pd-methods()
- plot_permutation_variable_importance-methods()
- plot_sample_clustering-methods()
- plot_univariate_importance-methods()
- plot_variable_importance-methods()
- precompute_data_assignment()
- precompute_feature_info()
- precompute_vimp()
- predict-methods()
- set_class_names-familiarCollection-method()
- set_data_set_names-familiarCollection-method()
- set_feature_names-familiarCollection-method()
- set_fs_method_names-familiarCollection-method()
- set_learner_names-familiarCollection-method()
- set_object_name-familiarData-method()
- set_object_name-familiarEnsemble-method()
- set_object_name-familiarModel-method()
- set_risk_group_names-familiarCollection-method()
- summary-methods()
- summon_familiar()
- theme_familiar()
- train_familiar()
- update_model_dir_path-methods()
- update_object-methods()
- vcov-methods()
- vimpTable-class()
- waiver()
R Codes
- aaa.R
- BatchNormalisation.R
- BootstrapConfidenceInterval.R
- CheckArguments.R
- CheckHyperparameters.R
- CheckPackages.R
- ClassBalance.R
- Clustering.R
- ClusteringMethod.R
- ClusterRepresentation.R
- CombatNormalisation.R
- DataObject.R
- DataParameterChecks.R
- DataPreProcessing.R
- DataProcessing.R
- DataServerBackend.R
- ErrorMessages.R
- Evaluation.R
- ExperimentData.R
- ExperimentSetup.R
- Familiar.R
- FamiliarCollection.R
- FamiliarCollectionExport.R
- FamiliarData.R
- FamiliarDataComputation.R
- FamiliarDataComputationAUCCurves.R
- FamiliarDataComputationCalibrationData.R
- FamiliarDataComputationCalibrationInfo.R
- FamiliarDataComputationConfusionMatrix.R
- FamiliarDataComputationDecisionCurveAnalysis.R
- FamiliarDataComputationFeatureExpression.R
- FamiliarDataComputationFeatureSimilarity.R
- FamiliarDataComputationHyperparameters.R
- FamiliarDataComputationICE.R
- FamiliarDataComputationModelPerformance.R
- FamiliarDataComputationPermutationVimp.R
- FamiliarDataComputationPredictionData.R
- FamiliarDataComputationRiskStratificationData.R
- FamiliarDataComputationRiskStratificationInfo.R
- FamiliarDataComputationSampleSimilarity.R
- FamiliarDataComputationUnivariateAnalysis.R
- FamiliarDataComputationVimp.R
- FamiliarDataElement.R
- FamiliarEnsemble.R
- FamiliarHyperparameterLearner.R
- FamiliarModel.R
- FamiliarNoveltyDetector.R
- FamiliarObjectConversion.R
- FamiliarObjectUpdate.R
- FamiliarS4Classes.R
- FamiliarS4Generics.R
- FamiliarSharedS4Methods.R
- FamiliarVimpMethod.R
- FeatureInfo.R
- FeatureInfoParameters.R
- FeatureSelection.R
- FunctionWrapperUtilities.R
- HyperparameterOptimisation.R
- HyperparameterOptimisationMetaLearners.R
- HyperparameterOptimisationUtilities.R
- HyperparameterS4BayesianAdditiveRegressionTrees.R
- HyperparameterS4GaussianProcess.R
- HyperparameterS4RandomSearch.R
- HyperparameterS4Ranger.R
- Imputation.R
- Iterations.R
- LearnerMain.R
- LearnerRecalibration.R
- LearnerS4Cox.R
- LearnerS4GLM.R
- LearnerS4GLMnet.R
- LearnerS4KNN.R
- LearnerS4MBoost.R
- LearnerS4Naive.R
- LearnerS4NaiveBayes.R
- LearnerS4Ranger.R
- LearnerS4RFSRC.R
- LearnerS4SurvivalRegression.R
- LearnerS4SVM.R
- LearnerS4XGBoost.R
- LearnerSurvivalGrouping.R
- LearnerSurvivalProbability.R
- Logger.R
- MetricS4.R
- MetricS4AUC.R
- MetricS4Brier.R
- MetricS4ConcordanceIndex.R
- MetricS4ConfusionMatrixMetrics.R
- MetricS4Regression.R
- ModelBuilding.R
- Normalisation.R
- NoveltyDetectorMain.R
- NoveltyDetectorS4IsolationTree.R
- NoveltyDetectorS4NoneNoveltyDetector.R
- OutcomeInfo.R
- PairwiseSimilarity.R
- ParallelFunctions.R
- ParseData.R
- ParseSettings.R
- PlotAll.R
- PlotAUCcurves.R
- PlotCalibration.R
- PlotColours.R
- PlotConfusionMatrix.R
- PlotDecisionCurves.R
- PlotFeatureRanking.R
- PlotFeatureSimilarity.R
- PlotGTable.R
- PlotICE.R
- PlotInputArguments.R
- PlotKaplanMeier.R
- PlotModelPerformance.R
- PlotPermutationVariableImportance.R
- PlotSampleClustering.R
- PlotUnivariateImportance.R
- PlotUtilities.R
- PredictS4Methods.R
- ProcessTimeUtilites.R
- Random.R
- RandomGrouping.R
- RankBordaAggregation.R
- RankMain.R
- RankSimpleAggregation.R
- RankStabilityAggregation.R
- SocketServer.R
- StringUtilities.R
- TestDataCreators.R
- TestFunctions.R
- TrainS4Methods.R
- Transformation.R
- TrimUtilities.R
- Utilities.R
- UtilitiesS4.R
- VimpMain.R
- VimpS4Concordance.R
- VimpS4CoreLearn.R
- VimpS4Correlation.R
- VimpS4MutualInformation.R
- VimpS4OtherMethods.R
- VimpS4Regression.R
- VimpTable.R
Selected R package: familiar
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