R Packages that start with:
A . B . C . D . E . F . G . H . I . J . K . L . M . N . O . P . Q . R . S . T . U . V . W . X . Y . Z .
Functions
- aaStandardizeNames()
- AlignOverlap()
- BoundWaterEnvironment.interact()
- BoundWaterEnvironment()
- BoundWaterEnvironment.quality()
- BoundWaterEnvPlots()
- BoundWaterEnvSummaryPlot()
- BvalueBarplot()
- BvalueBarplot.summ()
- CalcAlignOverlap()
- calcAtomClassHydrophilicity()
- calcAtomHydrationEstimate()
- calcBvalue()
- calcNearbyHydrationFraction()
- calcNumHydrogenBonds()
- check.cluster.method()
- CleanProteinStructures()
- ClusterSummaryPlots()
- ClusterWaters.MDS()
- ClusterWaters()
- colorPalettes()
- ConservationPlot()
- ConservationSet()
- ConservedWaters.MDS()
- ConservedWaters()
- ConservedWaterStats()
- CreatePyMOLscript()
- DetermineChainsOfInterest()
- ExtractFileTimeStamp()
- ExtractPDBids()
- FileTimeStamp()
- FreeSASA.diff()
- FreeSASAcheck()
- getAtomTypeCounts()
- getProtAtomsNearWater()
- getRCSBdata()
- getResidueData()
- getResTypeCounts()
- HasXWaters()
- HydrophilicityEvaluation()
- HydrophilicityTable()
- Mobility()
- MobilityBarplot()
- MobilityBarplot.summ()
- MobNormBvalEvalPlots()
- names.backbone.atoms()
- names.polar.atoms()
- names.res.AtomTypes()
- names.resATs.carb.sulf()
- names.resATs.nitro.neut()
- names.resATs.nitro.pos()
- names.resATs.oxy.neg()
- names.resATs.oxy.neut()
- names.residues()
- names.sidechain.atoms()
- names.waters()
- nBvalueBarplot()
- Nearby()
- NormalizedBvalue()
- normBvalueBarplot.summ()
- OccupancyBarplot()
- OccupancyBarplot.summ()
- openxlsxCellStyles()
- oxAlignOverlapSheet()
- oxClusterStatsSheet()
- oxClusterSummarySheet()
- oxInitWaterDataSheet()
- oxPDBcleanedSummarySheet()
- oxPlainDataSheet()
- oxRCSBinfoSheet()
- oxWaterOccurrenceSheet()
- PDB.1ecd()
- PDB.5rxn()
- ProtHetWatIndices()
- RemoveHydrogenAtoms()
- RemoveModeledAtoms()
- RemoveOoR.b()
- RemoveOoR.o()
- res2xyz()
- resAtomType2AtomClass()
- RescaleValues()
- RetainChainsOfInterest()
- RetainWatersWithinX()
- ReturnPDBfullPath()
- StandardizeAsparticAcidNames()
- StandardizeCysteineNames()
- StandardizeGlutamicAcidNames()
- StandardizeHistidineNames()
- StandardizeLysineNames()
- thrombin.1hai()
- thrombin10.PDBs.align()
- TimeSpan()
- UniqueAtomHashes()
- vanddraabe()
- write.basic.pdb()
- write.conservedWaters.pdb()
R Codes
Selected R package: vanddraabe
Click on the specific functions, references or examples using the links on the left
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